nb_seq_files_2_dict¶
-
yoda_powers.bio.
nb_seq_files_2_dict
(path_directory)[source]¶ Function that take a Path Directory and returna dictionnary with number of sequences in fasta file’s
- Parameters
pathDirectory (Path) – a directory Path
- Return type
dict1(), dict2()
- Returns
contient le nombre de sequences dans les fichiers (key = nom de fichier value = nombre de sequences)
contient le nombre de fichier qui ont x sequences (key = nombre de sequence = nombre de fichier)
- Raises
print – print(“ERROR: Sequence: “+nameFichier+” allready read”) with nameFichier is the current file read.
Example
>>> dico1,dico2 = nbSeqInFile2dict(path/to/directory/) >>> print(dict2txt(dico1)) ./out/gemo10_4497_ortho_rename_add.fasta 58 ./out/gemo10_6825_ortho_rename_add.fasta 59 ./out/gemo10_3497_ortho_rename_add.fasta 59 ./out/gemo10_6254_ortho_rename_add.fasta 59 >>> print(dict2txt(dico2)) 58 1 59 3